halophFGD

Basic Information

Locus ID: Sbi_jg50240

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000026l	16329664	16330928	+	Sbi_jg50240

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.77	11,925.49 Da	61.47	77.89	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23130.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
RefSeq	XP_048493656.1	uncharacterized protein LOC104901055 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q9C5S8	Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1
TrEMBL	A0A803LKZ1	Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg40251, Sbi_jg50240, Sbi_jg61232
Amaranthaceae	Salicornia europaea	1	Seu_jg22961
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000003699
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.6AG0002330