Basic Information
Locus ID:
Sbi_jg49863
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000026l | 4743466 | 4749380 | + | Sbi_jg49863 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 13,496.16 Da | 46.87 | 75.81 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 103 | 1.15E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 22 | 107 | 2.7E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 117 | 10.0401 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 84 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.3 | - | 0 |
| RefSeq | XP_050105521.1 | cysteine-rich receptor-like protein kinase 8 isoform X3 [Malus sylvestris] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6KTY4 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_025018 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20385 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg49863 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0226 |
| Poaceae | Zea mays | 5 | Zm00001eb072550_P001, Zm00001eb102860_P001 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000298 |