Basic Information
Locus ID:
Sbi_jg4979
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 11417867 | 11425886 | + | Sbi_jg4979 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 130,298.79 Da | 44.69 | 74.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 628 | 975 | 1.92066E-99 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 633 | 966 | 2.4E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 605 | 999 | 2.16E-56 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 244 | 605 | 2.43E-22 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 461 | 615 | 4.1E-10 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 616 | 1005 | 1.0E-91 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 181 | 432 | 1.7E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 484 | 522 | 190.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 626 | 981 | 1.4E-78 | IPR000300 |
| SMART | SM00320 | WD40_4 | 235 | 273 | 7.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 524 | 561 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 305 | 343 | 1.7 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1168 | 1186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1153 | 1186 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_010672504.2 | type I inositol polyphosphate 5-phosphatase 12 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KTV9 | IPPc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology