Basic Information
Locus ID:
Sbi_jg4965
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 10899295 | 10899716 | - | Sbi_jg4965 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.09 | 7,741.60 Da | 43.86 | 84.78 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.130.10.10 | - | 4 | 65 | 1.2E-7 | IPR015943 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20540.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_039003309.1 | WD repeat-containing protein DWA2-like [Hibiscus syriacus] | 0 |
| Q6NPN9 | WD repeat-containing protein DWA2 OS=Arabidopsis thaliana OX=3702 GN=DWA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3K7G5 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Corchorus capsularis OX=210143 GN=CCACVL1_02616 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 11 | Sbi_jg11027, Sbi_jg3220, Sbi_jg36147, Sbi_jg36263 ... |