Basic Information
Locus ID:
Sbi_jg49555
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000032l | 9087054 | 9090407 | + | Sbi_jg49555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 18,290.92 Da | 30.82 | 79.09 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 65 | 133 | 3.2E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 133 | 5.06E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 55 | 164 | 5.1E-23 | - |
| SMART | SM00220 | serkin_6 | 1 | 164 | 0.0017 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 165 | 16.188391 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_021759767.1 | serine/threonine-protein kinase CTR1-like [Chenopodium quinoa] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YQ04 | Dual-specificity kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg15421, Sbi_jg20712, Sbi_jg40410, Sbi_jg49555 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112214 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G10662 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0746s00001.v1.0 |
| Poaceae | Oryza coarctata | 1 | Oco04G011850 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G015490 |