Basic Information
Locus ID:
Sbi_jg49225
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000032l | 4075379 | 4080817 | - | Sbi_jg49225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 63,138.73 Da | 55.10 | 74.33 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 147 | 225 | 5.51506E-15 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 265 | 357 | 2.0E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 147 | 239 | 7.7E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 151 | 239 | 6.12E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 441 | 552 | 1.57E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 136 | 262 | 5.9E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 274 | 380 | 1.5E-14 | - |
| SMART | SM00875 | BACK_2 | 257 | 359 | 5.1E-11 | IPR011705 |
| SMART | SM00225 | BTB_4 | 144 | 242 | 1.0E-8 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 211 | 12.660429 | IPR000210 |
| Coils | Coil | Coil | 67 | 87 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_010669540.2 | BTB/POZ domain-containing protein POB1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KZH6 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology