Basic Information
Locus ID:
Sbi_jg49020
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000032l | 661426 | 663447 | + | Sbi_jg49020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 73,612.30 Da | 41.45 | 87.53 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 370 | 651 | 1.65089E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 365 | 646 | 1.7E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 649 | 2.56E-73 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 16 | 206 | 6.28E-18 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 450 | 2.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 661 | 3.6E-51 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 7 | 215 | 3.7E-16 | IPR009091 |
| SMART | SM00220 | serkin_6 | 364 | 657 | 9.4E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 662 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 370 | 392 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 497 | 509 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021760401.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M511 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology