Basic Information
Locus ID:
Sbi_jg48390
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000019l | 13732058 | 13749514 | + | Sbi_jg48390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 89,024.84 Da | 50.00 | 88.53 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 543 | 814 | 1.3E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 186 | 1.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 77 | 5.5E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 517 | 814 | 8.75E-66 | IPR011009 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 482 | 491 | 1.1E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 243 | 2.65E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 257 | 6.6E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 618 | 824 | 2.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 505 | 617 | 6.1E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 197 | 219 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 196 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 172 | 55.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 540 | 818 | 33.799355 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 346 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_048492763.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4S6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology