Basic Information
Locus ID:
Sbi_jg48162
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000019l | 4220032 | 4223902 | + | Sbi_jg48162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 99,768.53 Da | 40.79 | 86.45 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 578 | 851 | 1.90003E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 379 | 420 | 4.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 319 | 357 | 0.39 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 61 | 3.5E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 575 | 846 | 1.4E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 333 | 427 | 8.69E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 315 | 6.38E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 551 | 848 | 3.86E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 17 | 318 | 4.5E-74 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 650 | 873 | 4.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 319 | 445 | 3.2E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 536 | 649 | 4.2E-36 | - |
| SMART | SM00220 | serkin_6 | 572 | 852 | 3.8E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 383 | 406 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 0.026 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 207 | 73.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 572 | 852 | 41.346909 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 578 | 600 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 697 | 709 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021858158.1 | receptor-like kinase TMK4 [Spinacia oleracea] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R5X0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_103090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology