Basic Information
Locus ID:
Sbi_jg47342
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 25786206 | 25792920 | + | Sbi_jg47342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 56,922.79 Da | 41.26 | 73.73 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 323 | 2.6E-26 | IPR001245 |
| SUPERFAMILY | SSF48452 | TPR-like | 400 | 501 | 3.59E-16 | IPR011990 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 330 | 1.36E-46 | IPR011009 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 397 | 505 | 4.4E-17 | IPR011990 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 50 | 147 | 9.0E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 149 | 340 | 2.3E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 72 | 338 | 22.011597 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35230.1 | BR-signaling kinase 1. Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. | 0 |
| RefSeq | XP_010690264.1 | serine/threonine-protein kinase BSK1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q944A7 | Serine/threonine-protein kinase BSK1 OS=Arabidopsis thaliana OX=3702 GN=BSK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S2F2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_007170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg11660, jg23038, jg836 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_26354, gene_8662 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah009574, Ah035966 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g212860 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg10983, Sbi_jg39895, Sbi_jg47342 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14428, Seu_jg21616 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00014195, GOSA_00018793 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl12043, Sgl12243, Sgl17336, Sgl17472, Sgl55566, Sgl60784 |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000011547, gene:ENSEOMG00000014884 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1AG0022600, CQ.Regalona.r1.1BG0001570 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30048570, pistato.v30109000 |
| Apiaceae | Apium graveolens | 2 | Ag10G00425, AgUnG00632 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G014700, COCNU_07G014710 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708708 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2405.V1.1, AsparagusV1_07.2249.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri17G27832, Ftri5G09139 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G50990.1, AT4G35230.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10010042m.g.v1.0, Thhalv10018415m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g22710.v2.2, Sp7g33000.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB03g021210.2N, BniB03g044950.2N, BniB05g003150.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq03G0767, Ceq03G0769, Ceq07G1849 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl03G0862, Cgl03G0864, Cgl07G2024 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno02g09880, gene.Cymno10g03670 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g19590, gene.Thate08g20230 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5306 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.113 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00001772, Pov_00020478, Pov_00020553, Pov_00036941 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G02824, Lb1G05728, Lb3G19323 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.3045, AH01.5203, BH01.3387, BH01.5007, CH01.3630 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0115350, gene-QOZ80_2BG0169140 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0054940.1, HORVU.MOREX.r3.4HG0409600.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_012339, gene-QYE76_012445, gene-QYE76_071119 |
| Poaceae | Oryza coarctata | 4 | Oco05G002030, Oco06G002000, Oco19G009210, Oco20G009090 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g04050.1, LOC_Os10g39670.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G298300, gene-BS78_01G492200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0503084 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr01G038150, Chr04G005210, Chr06G028520, Chr07G006350 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G351200, Tel4E01G539400 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG030750, gene_TRIDC1BG036260 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G203400.1, TraesCS1B02G217500.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb002610_P003, Zm00001eb022440_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-3011, nbis-gene-36216 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g12830, Zma_g2140, Zma_g4485 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG01.291, evm.TU.LG02.480, evm.TU.LG03.529 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g12750, gene.Posoc06g07460 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_1_RagTag.2368, evm.TU.Scaffold_2_RagTag.39 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-29, nbisL1-mrna-43, nbisL1-mrna-5193 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-6216, nbisL1-mrna-6304, nbisL1-mrna-8284 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-3205, nbisL1-mrna-6902, nbisL1-mrna-9307 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000002l.815, evm.TU.utg000009l.1215 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00005558, Maker00010775, Maker00017020 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-14088, nbisL1-mrna-4587, nbisL1-mrna-8776 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-20093, nbisL1-mrna-22500, nbisL1-mrna-24130 |
| Salicaceae | Populus euphratica | 5 | populus_peu08620, populus_peu08621, populus_peu15453 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132628188 |
| Solanaceae | Solanum chilense | 1 | SOLCI006961100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017214 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.31414_chr11_-, gene_8836 |
| Tamaricaceae | Tamarix chinensis | 3 | TC04G2468, TC10G0220, TC12G0819 |
| Zosteraceae | Zostera marina | 3 | Zosma01g10900.v3.1, Zosma03g26370.v3.1, Zosma05g31900.v3.1 |