Basic Information
Locus ID:
Sbi_jg47118
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 19354660 | 19361093 | - | Sbi_jg47118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 149,544.38 Da | 46.95 | 77.27 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 756 | 1001 | 7.74869E-136 | - |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 40 | 92 | 6.3E-7 | IPR026960 |
| Pfam | PF04548 | AIG1 family | 784 | 918 | 2.4E-28 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1271 | 1368 | 1.0E-35 | IPR024283 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1142 | 1272 | 2.2E-63 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 777 | 918 | 3.7E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 748 | 1001 | 1.4E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 661 | 1272 | 1.5E-301 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 781 | 1010 | 32.315254 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1037 | 1070 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 577 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1062 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_010690410.2 | translocase of chloroplast 120, chloroplastic [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | I3XHK3 | Chloroplast preprotein import receptor Toc132 OS=Bienertia sinuspersici OX=338654 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology