Basic Information
Locus ID:
Sbi_jg47051
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 18216274 | 18219959 | + | Sbi_jg47051 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 103,353.40 Da | 33.88 | 91.26 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 603 | 876 | 2.66119E-96 | - |
| Pfam | PF13855 | Leucine rich repeat | 115 | 154 | 4.9E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 598 | 871 | 3.3E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 377 | 433 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 334 | 371 | 3.7E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 69 | 2.5E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 882 | 7.4E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 443 | 1.87E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 557 | 674 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 458 | 4.4E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 891 | 3.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 332 | 1.2E-83 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 420 | 447 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 396 | 419 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 167 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 0.033 | IPR003591 |
| SMART | SM00220 | serkin_6 | 597 | 877 | 1.4E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 242 | 264 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 877 | 41.177303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 625 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 485 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010690479.2 | receptor protein kinase TMK1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology