Basic Information
Locus ID:
Sbi_jg46728
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 12853302 | 12854256 | - | Sbi_jg46728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 11,669.36 Da | 25.57 | 92.86 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 51 | 1.32E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 84 | 1.6E-11 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16150.1 | wall associated kinase-like 4. Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily. Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+. | 0 |
| RefSeq | XP_022007551.1 | wall-associated receptor kinase-like 2 [Helianthus annuus] | 0 |
| Q9S9M2 | Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6L2JUH7 | ATP synthase CF1 alpha subunit, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=Tci_012175 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg11681, Sbi_jg46725, Sbi_jg46728 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl31699, Sgl31712, Sgl36127, Sgl37001 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g08050 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006304 |