Basic Information
Locus ID:
Sbi_jg4645
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 1342656 | 1347487 | - | Sbi_jg4645 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 76,273.31 Da | 34.62 | 95.55 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 420 | 681 | 6.79342E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 64 | 5.2E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 418 | 679 | 8.0E-38 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 199 | 4.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 231 | 7.29E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 680 | 4.21E-57 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 245 | 4.0E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 171 | 1.4E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 691 | 4.2E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 492 | 1.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 681 | 29.149267 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 420 | 442 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 676 | 695 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021736023.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Chenopodium quinoa] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LR13 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology