halophFGD

Basic Information

Locus ID: Sbi_jg45577

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: fucose metabolic process

Maps and Mapping Data

Chromosome/Scaffold	Start	End	Strand	ID
ptg000033l	16018135	16034092	-	Sbi_jg45577

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.71	57,714.15 Da	44.13	95.15	-0.20

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd11299	O-FucT_plant	94	418	1.44373E-158	IPR024709
Pfam	PF10250	GDP-fucose protein O-fucosyltransferase	94	411	2.3E-73	IPR019378
PIRSF	PIRSF009360	UCP009360	17	479	1.4E-174	IPR024709

Best hit

Source	Best Hit ID	Description
TAIR	AT1G14020.1	O-fucosyltransferase family protein.
RefSeq	XP_021747154.1	uncharacterized protein At1g04910-like [Chenopodium quinoa]
Swiss-Prot	Q6NQ51	Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT4 PE=1 SV=1
TrEMBL	A0A0K9R7N2	O-fucosyltransferase family protein OS=Spinacia oleracea OX=3562 GN=SOVF_104070 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg13228, jg17550, jg27377, jg40154, jg5399, jg9312
Aizoaceae	Mesembryanthemum crystallinum	3	gene_16960, gene_19717, gene_3812
Amaranthaceae	Atriplex hortensis	3	Ah001314, Ah013141, Ah035628
Amaranthaceae	Beta vulgaris	4	BVRB_2g028230, BVRB_5g113610, BVRB_6g139960, BVRB_6g153420
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg21671, Sbi_jg22141, Sbi_jg30948, Sbi_jg42969 ... Sbi_jg45577, Sbi_jg45585, Sbi_jg58326
Amaranthaceae	Salicornia europaea	3	Seu_jg11429, Seu_jg16071, Seu_jg25930
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00002109, GOSA_00004795, GOSA_00008688, GOSA_00023597
Amaranthaceae	Suaeda glauca	7	Sgl34921, Sgl35650, Sgl40320, Sgl40988, Sgl54879, Sgl62620 ... Sgl67186
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000002958, gene:ENSEOMG00000006576 ... gene:ENSEOMG00000014207, gene:ENSEOMG00000019176, gene:ENSEOMG00000019522, gene:ENSEOMG00000023826, gene:ENSEOMG00000048340
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2AG0018060, CQ.Regalona.r1.2BG0019620 ... CQ.Regalona.r1.5AG0018960, CQ.Regalona.r1.5BG0020310, CQ.Regalona.r1.6AG0000670, CQ.Regalona.r1.6BG0000610
Anacardiaceae	Pistacia vera	3	pistato.v30145440, pistato.v30192500, pistato.v30227470
Apiaceae	Apium graveolens	1	Ag8G01366
Arecaceae	Cocos nucifera	5	COCNU_01G013870, COCNU_04G012010, COCNU_05G007770 ... COCNU_11G005710, COCNU_16G005170
Arecaceae	Phoenix dactylifera	5	gene-LOC103702197, gene-LOC103702756, gene-LOC103706560 ... gene-LOC103709687, gene-LOC103721300
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.567.V1.1, AsparagusV1_05.2231.V1.1 ... AsparagusV1_05.603.V1.1
Asteraceae	Flaveria trinervia	9	Ftri10G16912, Ftri13G06670, Ftri16G23350, Ftri18G04891 ... Ftri18G16791, Ftri1G02827, Ftri8G09699, Ftri9G00666, Ftri9G05642
Brassicaceae	Arabidopsis thaliana	4	AT1G14020.1, AT2G03280.2, AT3G02250.1, AT5G15740.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10004114m.g.v1.0, Thhalv10007443m.g.v1.0 ... Thhalv10013286m.g.v1.0, Thhalv10020530m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g12380.v2.2, Sp2g14210.v2.2, Sp3g01320.v2.2 ... Sp6g28380.v2.2
Brassicaceae	Brassica nigra	6	BniB02g047100.2N, BniB03g005890.2N, BniB04g014180.2N ... BniB07g034730.2N, BniB07g061450.2N, BniB08g007550.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq03G2335, Ceq07G0176, Ceq08G0516
Casuarinaceae	Casuarina glauca	3	Cgl03G2472, Cgl07G0178, Cgl08G0473
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno03g11270, gene.Cymno05g07300, gene.Cymno05g14200
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate04g06950, gene.Thate04g23280, gene.Thate04g27140 ... gene.Thate06g05900, gene.Thate07g03930
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-11160, nbisL1-mrna-6519
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG02.342, evm.TU.LG03.300, evm.TU.LG03.426 ... evm.TU.LG03.427, evm.TU.LG03.428, evm.TU.LG10.497
Plantaginaceae	Plantago ovata	3	Pov_00023713, Pov_00027106, Pov_00033186
Plumbaginaceae	Limonium bicolor	6	Lb0G37418, Lb1G02013, Lb3G20872, Lb3G20877, Lb4G26100 ... Lb6G32536
Poaceae	Echinochloa crus-galli	19	AH01.3771, AH01.4840, AH02.516, AH03.2283, AH06.1165 ... AH07.3311, BH01.4120, BH01.4774, BH02.534, BH03.2110, BH06.1210, BH07.3127, CH01.4381, CH01.5419, CH02.595, CH03.2610, CH03.2612, CH06.1331, CH07.3196
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_1AG0011120, gene-QOZ80_1BG0059720 ... gene-QOZ80_2AG0144080, gene-QOZ80_2BG0199520, gene-QOZ80_3AG0235250, gene-QOZ80_3AG0246840, gene-QOZ80_3BG0281380, gene-QOZ80_3BG0292880, gene-QOZ80_6AG0517350, gene-QOZ80_6AG0538610, gene-QOZ80_6BG0469240, gene-QOZ80_6BG0491860
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.3HG0234260.1, HORVU.MOREX.r3.4HG0379530.1 ... HORVU.MOREX.r3.4HG0403370.1, HORVU.MOREX.r3.5HG0488620.1, HORVU.MOREX.r3.6HG0611280.1, HORVU.MOREX.r3.7HG0672060.1
Poaceae	Lolium multiflorum	7	gene-QYE76_005964, gene-QYE76_025215, gene-QYE76_029450 ... gene-QYE76_049937, gene-QYE76_068159, gene-QYE76_068197, gene-QYE76_070485
Poaceae	Oryza coarctata	10	Oco01G002690, Oco02G002740, Oco03G020460, Oco04G021100 ... Oco05G004040, Oco05G012550, Oco06G013930, Oco11G007390, Oco12G007460, Oco17G007320
Poaceae	Oryza sativa	6	LOC_Os01g07410.1, LOC_Os02g49460.1, LOC_Os03g07310.1 ... LOC_Os03g21090.1, LOC_Os06g17390.1, LOC_Os09g29940.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G366900, gene-BS78_01G467000 ... gene-BS78_02G214800, gene-BS78_03G051600, gene-BS78_04G261800, gene-BS78_10G119400
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0101292, Pt_Chr0107832, Pt_Chr0207423, Pt_Chr0400358 ... Pt_Chr0404421, Pt_Chr0701717, Pt_Chr0703642
Poaceae	Sporobolus alterniflorus	16	Chr01G033780, Chr01G036230, Chr02G019450, Chr03G004940 ... Chr05G010420, Chr08G000020, Chr09G021180, Chr0G008270, Chr0G015340, Chr11G017840, Chr12G003230, Chr12G005830, Chr13G005450, Chr14G005610, Chr14G015740, Chr21G005180
Poaceae	Thinopyrum elongatum	6	Tel3E01G166600, Tel4E01G314200, Tel4E01G479900 ... Tel5E01G403000, Tel6E01G524600, Tel7E01G386600
Poaceae	Triticum dicoccoides	12	gene_TRIDC3AG011440, gene_TRIDC3BG015430 ... gene_TRIDC4AG002440, gene_TRIDC4AG018210, gene_TRIDC4BG031490, gene_TRIDC4BG049160, gene_TRIDC5AG039290, gene_TRIDC5BG041620, gene_TRIDC6AG043970, gene_TRIDC6BG051620, gene_TRIDC7AG026890, gene_TRIDC7BG017470
Poaceae	Triticum aestivum	18	TraesCS3A02G095200.2, TraesCS3B02G110800.1 ... TraesCS3D02G095400.1, TraesCS4A02G018000.1, TraesCS4A02G131200.2, TraesCS4B02G173400.1, TraesCS4B02G286100.1, TraesCS4D02G175500.2, TraesCS4D02G284800.1, TraesCS5A02G251600.3, TraesCS5B02G249700.2, TraesCS5D02G259500.1, TraesCS6A02G287900.1, TraesCS6B02G317300.1, TraesCS6D02G268600.1, TraesCS7A02G213300.1, TraesCS7B02G120300.1, TraesCS7D02G215200.1
Poaceae	Zea mays	9	Zm00001eb005340_P002, Zm00001eb015680_P001 ... Zm00001eb123150_P001, Zm00001eb253330_P001, Zm00001eb280840_P001, Zm00001eb315920_P001, Zm00001eb336480_P001, Zm00001eb380680_P002, Zm00001eb402380_P002
Poaceae	Zoysia japonica	4	nbis-gene-19571, nbis-gene-45580, nbis-gene-53996 ... nbis-gene-8856
Poaceae	Zoysia macrostachya	7	Zma_g10021, Zma_g1287, Zma_g14321, Zma_g29502, Zma_g31752 ... Zma_g32731, Zma_g4341
Portulacaceae	Portulaca oleracea	9	evm.TU.LG02.96, evm.TU.LG03.164, evm.TU.LG05.716 ... evm.TU.LG09.1330, evm.TU.LG12.1554, evm.TU.LG13.424, evm.TU.LG14.1887, evm.TU.LG21.123, evm.TU.LG25.606
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g14800, gene.Posoc01g29860, gene.Posoc02g27960
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_11_RagTag.211, evm.TU.Scaffold_15_RagTag.505 ... evm.TU.Scaffold_17_RagTag.378, evm.TU.Scaffold_17_RagTag.510, evm.TU.Scaffold_4_RagTag.819, evm.TU.Scaffold_6_RagTag.415
Rhizophoraceae	Carallia pectinifolia	10	nbisL1-mrna-14234, nbisL1-mrna-15314, nbisL1-mrna-1981 ... nbisL1-mrna-2126, nbisL1-mrna-22808, nbisL1-mrna-22929, nbisL1-mrna-26675, nbisL1-mrna-26676, nbisL1-mrna-26678, nbisL1-mrna-28533
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10057, nbisL1-mrna-1274, nbisL1-mrna-14949 ... nbisL1-mrna-15740, nbisL1-mrna-17626
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-14916, nbisL1-mrna-1561, nbisL1-mrna-15848 ... nbisL1-mrna-329
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000001l.252, evm.TU.utg000005l.253 ... evm.TU.utg000008l.526, evm.TU.utg000011l.224, evm.TU.utg000013l.273
Rhizophoraceae	Kandelia obovata	4	Maker00001542, Maker00006472, Maker00007907, Maker00010171
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-11733, nbisL1-mrna-13860, nbisL1-mrna-13861 ... nbisL1-mrna-13862, nbisL1-mrna-14379, nbisL1-mrna-341, nbisL1-mrna-7186
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-14962, nbisL1-mrna-19022, nbisL1-mrna-19306 ... nbisL1-mrna-2522, nbisL1-mrna-2523, nbisL1-mrna-2524, nbisL1-mrna-3816
Salicaceae	Populus euphratica	9	populus_peu06753, populus_peu09398, populus_peu09425 ... populus_peu20643, populus_peu22010, populus_peu25095, populus_peu28357, populus_peu28372, populus_peu37459
Solanaceae	Lycium barbarum	6	gene-LOC132600245, gene-LOC132603533, gene-LOC132626083 ... gene-LOC132632821, gene-LOC132639925, gene-LOC132642038
Solanaceae	Solanum chilense	4	SOLCI000642700, SOLCI001741300, SOLCI003178400 ... SOLCI004074500
Solanaceae	Solanum pennellii	5	gene-LOC107007491, gene-LOC107008438, gene-LOC107014773 ... gene-LOC107020228, gene-LOC107021118
Tamaricaceae	Reaumuria soongarica	5	STRG.15349_chr06_+, STRG.16659_chr08_-, gene_13653, gene_48 ... gene_7138
Tamaricaceae	Tamarix chinensis	5	TC01G0124, TC01G3035, TC03G0790, TC05G1348, TC09G1274
Zosteraceae	Zostera marina	8	Zosma02g17010.v3.1, Zosma02g17020.v3.1, Zosma02g21040.v3.1 ... Zosma03g20490.v3.1, Zosma03g20520.v3.1, Zosma03g20550.v3.1, Zosma03g30360.v3.1, Zosma04g19570.v3.1