Basic Information
Locus ID:
Sbi_jg45383
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000033l | 13263953 | 13276019 | + | Sbi_jg45383 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 74,579.23 Da | 39.44 | 89.08 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 315 | 580 | 8.42745E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 143 | 227 | 1.5E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 71 | 113 | 2.1E-6 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 310 | 575 | 1.6E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 580 | 2.83E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 385 | 2.4E-28 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 54 | 115 | 1.1E-8 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 131 | 229 | 6.9E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 592 | 3.8E-53 | - |
| SMART | SM00220 | serkin_6 | 309 | 578 | 2.2E-22 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 116 | 10.713611 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 126 | 230 | 12.397301 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 586 | 33.870026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 315 | 337 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 428 | 440 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 615 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 634 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q1PEM5 | Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana OX=3702 GN=PERK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0JKI9 | LOW QUALITY PROTEIN: proline-rich receptor-like protein kinase PERK2 OS=Raphanus sativus OX=3726 GN=LOC108807762 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |