halophFGD

Basic Information

Locus ID: Sbi_jg4509

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: U-box domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000014l	7206784	7207471	+	Sbi_jg4509

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.88	12,736.66 Da	51.12	85.05	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_010670279.2	U-box domain-containing protein 33 isoform X2 [Beta vulgaris subsp. vulgaris]	0
TrEMBL	A0A803MHG0	Serine/threonine-protein kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg4509
Casuarinaceae	Casuarina equisetifolia	6	Ceq01G0563, Ceq05G0394, Ceq05G0397, Ceq05G0400, Ceq05G1210 ... Ceq05G1212
Casuarinaceae	Casuarina glauca	1	Cgl05G1223
Poaceae	Zoysia japonica	1	nbis-gene-37323
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g13790