Basic Information
Locus ID:
Sbi_jg45062
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000033l | 7827373 | 7838131 | - | Sbi_jg45062 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 97,238.71 Da | 31.83 | 93.22 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 593 | 861 | 1.32343E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 588 | 856 | 3.9E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 380 | 5.44E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 876 | 2.43E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 194 | 9.1E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 562 | 662 | 3.1E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 874 | 1.0E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 390 | 2.0E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 587 | 862 | 3.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 587 | 863 | 37.629669 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 593 | 615 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 707 | 719 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 891 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720987.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology