Basic Information
Locus ID:
Sbi_jg45048
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000033l | 7594218 | 7599531 | - | Sbi_jg45048 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 29,108.22 Da | 40.01 | 95.16 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 143 | 247 | 1.8E-11 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 14 | 60 | 2.1E-11 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 15 | 250 | 8.63E-56 | IPR011013 |
| Gene3D | G3DSA:2.60.40.1360 | - | 127 | 254 | 1.3E-33 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 13 | 108 | 3.0E-27 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_021851647.1 | alpha-mannosidase At3g26720-like [Spinacia oleracea] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1N9A3 | Alpha-mannosidase OS=Artemisia annua OX=35608 GN=CTI12_AA158770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology