Basic Information
Locus ID:
Sbi_jg44767
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000033l | 2264069 | 2267236 | - | Sbi_jg44767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 116,067.56 Da | 35.57 | 106.86 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 785 | 1053 | 8.80153E-90 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 246 | 267 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 198 | 219 | 0.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 64 | 4.1E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 781 | 980 | 5.4E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 606 | 663 | 2.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 456 | 689 | 1.19E-33 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 292 | 399 | 2.31E-15 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 277 | 4.08E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 759 | 1050 | 4.05E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 86 | 8.9E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 402 | 1.4E-67 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 743 | 854 | 1.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 855 | 1054 | 3.6E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 407 | 696 | 2.9E-48 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 356 | 73.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 779 | 1054 | 2.2E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 9.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 180.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 779 | 1055 | 39.566025 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 899 | 911 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 785 | 807 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010682896.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LR58 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology