Basic Information
Locus ID:
Sbi_jg43140
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 96461278 | 96465436 | - | Sbi_jg43140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 82,629.39 Da | 39.89 | 97.85 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 460 | 714 | 1.2E-14 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 110 | 324 | 1.65E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 718 | 1.07E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 528 | 2.7E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 537 | 720 | 8.3E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 344 | 5.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 218 | 5.1E-23 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 719 | 20.414455 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14390.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010683241.1 | probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M9S4 | Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana OX=3702 GN=At1g14390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RKK9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_056170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34740, jg9365 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3742 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014065 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g154470 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg43140, Sbi_jg45739 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11588 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026534 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl36001, Sgl41331 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001686, gene:ENSEOMG00000012095 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0001640, CQ.Regalona.r1.6BG0001750 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30126480 |
| Apiaceae | Apium graveolens | 3 | Ag8G01404, Ag8G01406, AgUnG00600 |
| Arecaceae | Cocos nucifera | 1 | COCNU_03G015840 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709770 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.2308.V1.1, AsparagusV1_01.2309.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G07693 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G14390.1, AT2G02780.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10003702m.g.v1.0, Thhalv10006929m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g12760.v2.2, Sp2g13880.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g065570.2N, BniB06g039520.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0060 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl07G0050, Cgl07G0051 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno16g00810 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g24210, gene.Thate09g13900 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.206 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027217 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G02049, Lb2G13280, Lb7G34590 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2141, BH06.1953, CH06.2176 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0543760, gene-QOZ80_6BG0497140 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0715280.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_034651, gene-QYE76_034799 |
| Poaceae | Oryza coarctata | 2 | Oco11G011850, Oco12G012020 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g38970.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G176800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302876, Pt_Chr0400574 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G029440, Chr05G007140, Chr10G017180, Chr11G005310 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G609100, Tel7E01G610000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG051400, gene_TRIDC7BG042510 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G368000.1, TraesCS7B02G260600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb386180_P003 |
| Poaceae | Zoysia japonica | 5 | nbis-gene-10143, nbis-gene-41125, nbis-gene-55226 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g30751, Zma_g32994 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.279, evm.TU.LG12.1427, evm.TU.LG13.334 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g10890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.344 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22985 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-309 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14869 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.238 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006586 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7148 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-15761 |
| Salicaceae | Populus euphratica | 1 | populus_peu03115 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641524 |
| Solanaceae | Solanum chilense | 1 | SOLCI002991400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020638 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.29263_chr10_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G0653 |
| Zosteraceae | Zostera marina | 2 | Zosma01g05790.v3.1, Zosma01g37730.v3.1 |