Basic Information
Locus ID:
Sbi_jg4308
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 3993446 | 3996352 | + | Sbi_jg4308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 64,322.83 Da | 31.98 | 99.20 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 1.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 199 | 1.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 340 | 512 | 1.0E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 317 | 573 | 3.56E-38 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 234 | 2.47E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 578 | 3.4E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 266 | 1.1E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 413 | 5.5E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 516 | 2.5E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 578 | 20.753672 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021756271.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Chenopodium quinoa] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LI45 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology