Basic Information
Locus ID:
Sbi_jg42996
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 94020488 | 94025204 | - | Sbi_jg42996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 57,617.29 Da | 74.96 | 47.35 | -1.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 233 | 289 | 1.2E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 408 | 465 | 9.7E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 399 | 467 | 1.19E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 230 | 291 | 6.93E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 392 | 468 | 1.4E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 219 | 292 | 2.1E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 232 | 290 | 4.4E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 407 | 466 | 7.6E-40 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 233 | 291 | 24.546776 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 402 | 467 | 37.699879 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 490 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MNJ9 | WRKY transcription factor 3 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology