Basic Information
Locus ID:
Sbi_jg42640
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 89072223 | 89074325 | + | Sbi_jg42640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 78,979.44 Da | 43.30 | 62.33 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 9.67013E-20 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 8.5E-22 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 451 | 656 | 2.0E-74 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 62 | 126 | 1.3E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 63 | 175 | 6.2E-24 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 7.1E-24 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 18.272976 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 1.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 1.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 1.2E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 338 | - | - |
| Coils | Coil | Coil | 294 | 321 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_010682744.1 | uncharacterized protein LOC104897549 [Beta vulgaris subsp. vulgaris] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A803L194 | J domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology