Basic Information
Locus ID:
Sbi_jg42445
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 85669857 | 85682441 | - | Sbi_jg42445 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 104,780.08 Da | 32.54 | 91.62 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 631 | 898 | 1.53926E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 626 | 893 | 2.4E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 169 | 4.9E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 921 | 2.97E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 295 | 1.36E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 279 | 390 | 1.16E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 597 | 700 | 1.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 413 | 4.0E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 921 | 1.1E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 278 | 1.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 178 | 2.2E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 625 | 898 | 8.2E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 898 | 38.689716 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 903 | 923 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010682077.2 | leucine-rich repeat receptor protein kinase HPCA1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology