Basic Information
Locus ID:
Sbi_jg42205
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 80241288 | 80250742 | - | Sbi_jg42205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 104,367.94 Da | 33.96 | 94.91 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 640 | 906 | 4.57625E-92 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 138 | 160 | 0.062 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 635 | 902 | 2.1E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 240 | 298 | 4.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 281 | 375 | 5.55E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 924 | 3.51E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 299 | 1.19E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 183 | 2.1E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 711 | 914 | 1.3E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 283 | 1.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 606 | 710 | 4.9E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 405 | 1.2E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 634 | 908 | 7.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 908 | 39.69323 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 755 | 767 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720965.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology