Basic Information
Locus ID:
Sbi_jg42204
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 80184805 | 80195556 | - | Sbi_jg42204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 104,385.95 Da | 37.25 | 95.33 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 646 | 911 | 1.10457E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 644 | 908 | 7.0E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 62 | 2.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 377 | 2.01E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 918 | 1.16E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 923 | 2.5E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 381 | 8.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 613 | 714 | 3.8E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 185 | 1.0E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 640 | 915 | 5.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 912 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 759 | 771 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 646 | 668 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720954.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMJ9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology