Basic Information
Locus ID:
Sbi_jg42038
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 74908484 | 74917479 | - | Sbi_jg42038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.24 | 40,019.74 Da | 40.21 | 86.79 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 2.4837E-105 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 286 | 1.7E-55 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 311 | 2.7E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 105 | 3.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 302 | 7.2E-51 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 6.0E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.251484 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 236 | 7.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 257 | 279 | 7.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 140 | 158 | 7.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 102 | 115 | 7.0E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034910787.1 | serine/threonine-protein kinase STY13-like [Populus alba] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2K1X447 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G065500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology