Basic Information
Locus ID:
Sbi_jg41965
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 72250931 | 72257239 | - | Sbi_jg41965 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 54,002.48 Da | 38.55 | 88.20 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 347 | 2.1E-84 | IPR000490 |
| Pfam | PF07983 | X8 domain | 364 | 435 | 2.2E-17 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 346 | 9.53E-86 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 352 | 1.4E-116 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 448 | 8.6E-10 | - |
| SMART | SM00768 | X8_cls | 363 | 448 | 1.2E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 261 | 274 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021727203.1 | glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N0L7 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology