halophFGD

Basic Information

Locus ID: Sbi_jg41810

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000005l	64407797	64408757	+	Sbi_jg41810

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.71	14,147.20 Da	57.83	97.58	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Coils	Coil	Coil	63	83	-	-

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	8	jg28255, jg28388, jg3112, jg32942, jg35691, jg36492, jg36904 ... jg511
Aizoaceae	Mesembryanthemum crystallinum	5	gene_10373, gene_10948, gene_21402, gene_2204, gene_5986
Amaranthaceae	Atriplex hortensis	6	Ah004683, Ah005652, Ah007645, Ah007650, Ah015102, Ah026211
Amaranthaceae	Beta vulgaris	4	BVRB_4g076650, BVRB_4g085250, BVRB_5g108290, BVRB_9g219470
Amaranthaceae	Salicornia bigelovii	17	Sbi_jg11581, Sbi_jg11582, Sbi_jg11583, Sbi_jg11584 ... Sbi_jg17232, Sbi_jg19109, Sbi_jg19110, Sbi_jg24320, Sbi_jg24683, Sbi_jg24684, Sbi_jg37535, Sbi_jg41810, Sbi_jg46522, Sbi_jg61848, Sbi_jg61849, Sbi_jg8151, Sbi_jg8541
Amaranthaceae	Salicornia europaea	5	Seu_jg11870, Seu_jg20055, Seu_jg20834, Seu_jg491, Seu_jg5377
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00001730, GOSA_00005158, GOSA_00005159, GOSA_00015416 ... GOSA_00022721
Amaranthaceae	Suaeda glauca	15	Sgl21220, Sgl21221, Sgl24395, Sgl26558, Sgl26559, Sgl26564 ... Sgl26565, Sgl26566, Sgl29570, Sgl42783, Sgl47537, Sgl52510, Sgl56386, Sgl57760, Sgl61917
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000007815, gene:ENSEOMG00000009554 ... gene:ENSEOMG00000011352, gene:ENSEOMG00000012114, gene:ENSEOMG00000015846, gene:ENSEOMG00000022572, gene:ENSEOMG00000023795, gene:ENSEOMG00000024703, gene:ENSEOMG00000027272, gene:ENSEOMG00000035632, gene:ENSEOMG00000038441, gene:ENSEOMG00000042429, gene:ENSEOMG00000043166, gene:ENSEOMG00000044456, gene:ENSEOMG00000052042
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.4AG0007300, CQ.Regalona.r1.4BG0007530 ... CQ.Regalona.r1.4BG0018000, CQ.Regalona.r1.5AG0000910, CQ.Regalona.r1.5BG0010520, CQ.Regalona.r1.7BG0009780, CQ.Regalona.r1.8AG0016250, CQ.Regalona.r1.8BG0017330, CQ.Regalona.r1.9AG0014850
Anacardiaceae	Pistacia vera	9	pistato.v30020930, pistato.v30082040, pistato.v30082220 ... pistato.v30082310, pistato.v30082330, pistato.v30101500, pistato.v30101510, pistato.v30131840, pistato.v30211750
Apiaceae	Apium graveolens	6	Ag6G01868, Ag6G02028, Ag7G00134, Ag7G00136, Ag7G00222 ... Ag8G00366
Arecaceae	Cocos nucifera	5	COCNU_01G001480, COCNU_03G004660, COCNU_07G015560 ... COCNU_15G002740, scaffold023055G000040
Arecaceae	Phoenix dactylifera	6	gene-LOC103697005, gene-LOC103701408, gene-LOC103702179 ... gene-LOC103709371, gene-LOC103716081, gene-LOC120108368
Asparagaceae	Asparagus officinalis	8	AsparagusV1_02.2169.V1.1, AsparagusV1_04.1057.V1.1 ... AsparagusV1_05.2249.V1.1, AsparagusV1_07.771.V1.1, AsparagusV1_08.2684.V1.1, AsparagusV1_08.2685.V1.1, AsparagusV1_08.2792.V1.1, AsparagusV1_09.722.V1.1
Asteraceae	Flaveria trinervia	6	Ftri12G31397, Ftri14G02097, Ftri14G26220, Ftri15G18536 ... Ftri3G15988, Ftri4G04924
Brassicaceae	Arabidopsis thaliana	5	AT1G10930.1, AT1G31360.1, AT1G60930.1, AT3G05740.1 ... AT4G35740.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10006602m.g.v1.0, Thhalv10006954m.g.v1.0 ... Thhalv10020334m.g.v1.0, Thhalv10023226m.g.v1.0, Thhalv10024545m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g09640.v2.2, Sp1g27200.v2.2, Sp2g03660.v2.2 ... Sp3g04620.v2.2, Sp7g33500.v2.2
Brassicaceae	Brassica nigra	6	BniB01g057930.2N, BniB02g005920.2N, BniB03g004180.2N ... BniB03g013340.2N, BniB04g020590.2N, BniB07g019200.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq03G0024, Ceq06G1127, Ceq09G0389, Ceq09G0399
Casuarinaceae	Casuarina glauca	5	Cgl03G0030, Cgl06G0692, Cgl06G0793, Cgl06G1174, Cgl09G0429
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno04g13480, gene.Cymno05g13160, gene.Cymno07g01730 ... gene.Cymno08g03930, gene.Cymno09g01390, gene.Cymno18g04950
Dunaliellaceae	Dunaliella salina	7	Dusal.0020s00027.v1.0, Dusal.0020s00028.v1.0 ... Dusal.0020s00029.v1.0, Dusal.0117s00007.v1.0, Dusal.0209s00011.v1.0, Dusal.0312s00009.v1.0, Dusal.0312s00010.v1.0
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate01g30250, gene.Thate02g06120, gene.Thate06g06100 ... gene.Thate06g09850, gene.Thate09g19510
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-8263
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG01.509, evm.TU.LG02.2837, evm.TU.LG03.2526 ... evm.TU.LG05.926, evm.TU.LG08.757
Plantaginaceae	Plantago ovata	5	Pov_00001994, Pov_00003378, Pov_00003709, Pov_00036705 ... Pov_00039241
Plumbaginaceae	Limonium bicolor	7	Lb1G08105, Lb1G08107, Lb2G14222, Lb5G26915, Lb5G29560 ... Lb5G29606, Lb8G35696
Poaceae	Echinochloa crus-galli	13	AH03.4079, AH04.2158, AH07.331, AH07.3692, BH03.1658 ... BH04.2336, BH04.2341, BH07.3505, BH07.433, CH03.1812, CH03.4491, CH04.2578, CH07.3580
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_2AG0101190, gene-QOZ80_2AG0148060 ... gene-QOZ80_2BG0154570, gene-QOZ80_2BG0203460, gene-QOZ80_2BG0203470, gene-QOZ80_7BG0613160, gene-QOZ80_9AG0671310, gene-QOZ80_9AG0692270, gene-QOZ80_9BG0694780, gene-QOZ80_9BG0718310
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0111650.1, HORVU.MOREX.r3.2HG0169030.1 ... HORVU.MOREX.r3.4HG0354110.1, HORVU.MOREX.r3.4HG0362480.1, HORVU.MOREX.r3.6HG0620770.1
Poaceae	Lolium multiflorum	6	gene-QYE76_016504, gene-QYE76_025762, gene-QYE76_025763 ... gene-QYE76_044072, gene-QYE76_065337, gene-QYE76_065610
Poaceae	Oryza coarctata	9	Oco03G023420, Oco04G024000, Oco07G006170, Oco08G006110 ... Oco13G016010, Oco14G016830, Oco21G009650, Oco22G010950, Oco22G011660
Poaceae	Paspalum vaginatum	6	gene-BS78_01G266600, gene-BS78_02G392600, gene-BS78_K262600 ... gene-BS78_04G033600, gene-BS78_04G296900, gene-BS78_05G256200
Poaceae	Puccinellia tenuiflora	10	Pt_Chr0103464, Pt_Chr0103556, Pt_Chr0203032, Pt_Chr0206934 ... Pt_Chr0302632, Pt_Chr0302666, Pt_Chr0305440, Pt_Chr0305467, Pt_Chr0604974, Pt_Chr0604976
Poaceae	Sporobolus alterniflorus	12	Chr07G013990, Chr0G002400, Chr0G003660, Chr0G012030 ... Chr0G029140, Chr0G032350, Chr23G019700, Chr24G012260, Chr26G000220, Chr26G000230, Chr26G000240, Chr31G008460
Poaceae	Thinopyrum elongatum	5	Tel2E01G226200, Tel2E01G537900, Tel4E01G215000 ... Tel4E01G228200, Tel6E01G603000
Poaceae	Triticum dicoccoides	10	gene_TRIDC2AG012300, gene_TRIDC2AG044270 ... gene_TRIDC2BG015080, gene_TRIDC2BG046980, gene_TRIDC4AG027310, gene_TRIDC4AG028650, gene_TRIDC4BG019850, gene_TRIDC4BG021710, gene_TRIDC6AG050960, gene_TRIDC6BG059650
Poaceae	Triticum aestivum	15	TraesCS2A02G103300.1, TraesCS2A02G304900.1 ... TraesCS2B02G120600.1, TraesCS2B02G321700.1, TraesCS2D02G102800.1, TraesCS2D02G303500.1, TraesCS4A02G170100.1, TraesCS4A02G178600.5, TraesCS4B02G126600.1, TraesCS4B02G138800.1, TraesCS4D02G133500.1, TraesCS4D02G144400.2, TraesCS6A02G339900.1, TraesCS6B02G371000.2, TraesCS6D02G320500.1
Poaceae	Zea mays	7	Zm00001eb026880_P004, Zm00001eb165270_P001 ... Zm00001eb231860_P001, Zm00001eb239640_P001, Zm00001eb257010_P001, Zm00001eb330800_P002, Zm00001eb431670_P001
Poaceae	Zoysia japonica	6	nbis-gene-33262, nbis-gene-33765, nbis-gene-45943 ... nbis-gene-45945, nbis-gene-45999, nbis-gene-8520
Poaceae	Zoysia macrostachya	6	Zma_g12171, Zma_g14558, Zma_g14559, Zma_g19176, Zma_g24573 ... Zma_g7958
Portulacaceae	Portulaca oleracea	12	evm.TU.LG01.469, evm.TU.LG02.2474, evm.TU.LG02.2475 ... evm.TU.LG04.291, evm.TU.LG06.1256, evm.TU.LG08.742, evm.TU.LG10.556, evm.TU.LG11.604, evm.TU.LG17.567, evm.TU.LG22.1186, evm.TU.LG23.694, evm.TU.LG23.695
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g28100, gene.Posoc01g30810, gene.Posoc05g11510 ... gene.Posoc05g19370, gene.Posoc07g02060, gene.Posoc08g03910
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_14_RagTag.743, evm.TU.Scaffold_1_RagTag.73 ... evm.TU.Scaffold_1_RagTag.787, evm.TU.Scaffold_6_RagTag.2163
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-16970, nbisL1-mrna-17701, nbisL1-mrna-7310 ... nbisL1-mrna-8202
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-12996, nbisL1-mrna-13389, nbisL1-mrna-17648 ... nbisL1-mrna-5172
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-11667, nbisL1-mrna-11668, nbisL1-mrna-17086 ... nbisL1-mrna-5159, nbisL1-mrna-5799
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000007l.8, evm.TU.utg000011l.1329 ... evm.TU.utg000012l.50, evm.TU.utg000012l.504
Rhizophoraceae	Kandelia obovata	4	Maker00007012, Maker00011357, Maker00011494, Maker00015978
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-15706, nbisL1-mrna-15707, nbisL1-mrna-15843 ... nbisL1-mrna-7908, nbisL1-mrna-8301
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-2951, nbisL1-mrna-67, nbisL1-mrna-897 ... nbisL1-mrna-9019, nbisL1-mrna-9020
Salicaceae	Populus euphratica	7	populus_peu13308, populus_peu14072, populus_peu17048 ... populus_peu17049, populus_peu33352, populus_peu33356, populus_peu34153
Solanaceae	Lycium barbarum	7	gene-LOC132598421, gene-LOC132598678, gene-LOC132614398 ... gene-LOC132616885, gene-LOC132635550, gene-LOC132635553, gene-LOC132644378
Solanaceae	Solanum chilense	5	SOLCI000829600, SOLCI001635100, SOLCI002212700 ... SOLCI002906700, SOLCI003190000
Solanaceae	Solanum pennellii	5	gene-LOC107012022, gene-LOC107020301, gene-LOC107024232 ... gene-LOC107029016, gene-LOC107031384
Tamaricaceae	Reaumuria soongarica	6	STRG.14383_chr08_-, gene_10751, gene_16133, gene_3038 ... gene_6451, gene_8163
Tamaricaceae	Tamarix chinensis	7	TC01G1360, TC01G1361, TC09G0552, TC10G1035, TC10G1036 ... TC11G2030, TC11G2416
Zosteraceae	Zostera marina	6	Zosma01g27830.v3.1, Zosma01g28950.v3.1, Zosma03g06920.v3.1 ... Zosma05g02290.v3.1, Zosma05g16550.v3.1, Zosma05g22360.v3.1