Basic Information
Locus ID:
Sbi_jg41360
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
ATP-dependent microtubule motor activity, plus-end-directed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 37392797 | 37396216 | + | Sbi_jg41360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 74,622.86 Da | 42.50 | 69.67 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 96 | 153 | 4.0E-17 | IPR025452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 673 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 452 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048490666.1 | uncharacterized protein LOC125492338 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803KUE9 | PH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 12 | gene_11363, gene_14535, gene_15408, gene_22663, gene_25519 ... |
| Amaranthaceae | Atriplex hortensis | 3 | Ah003715, Ah007052, Ah037022 |
| Amaranthaceae | Salicornia bigelovii | 43 | Sbi_jg14545, Sbi_jg16734, Sbi_jg25736, Sbi_jg27296 ... |
| Amaranthaceae | Salicornia europaea | 44 | Seu_jg10099, Seu_jg10376, Seu_jg10425, Seu_jg10537 ... |
| Amaranthaceae | Suaeda aralocaspica | 28 | GOSA_00003916, GOSA_00009010, GOSA_00014468, GOSA_00015280 ... |
| Amaranthaceae | Suaeda glauca | 22 | Sgl03949, Sgl03953, Sgl09073, Sgl13640, Sgl14611, Sgl18821 ... |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000009169, gene:ENSEOMG00000043177 |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.5BG0012130, CQ.Regalona.r1.6BG0015370 ... |
| Arecaceae | Phoenix dactylifera | 6 | gene-LOC120104662, gene-LOC120104664, gene-LOC120105012 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g03110 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G34621 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G094000 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2AG017150 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG07.1296, evm.TU.LG08.476, evm.TU.LG11.534 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132609421 |