Basic Information
Locus ID:
Sbi_jg41265
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 30315880 | 30321082 | - | Sbi_jg41265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 110,513.97 Da | 35.16 | 94.46 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 138 | 196 | 8.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 2.2E-13 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 114 | 134 | 1.2 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 689 | 971 | 1.4E-38 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 69 | 415 | 3.26E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 356 | 603 | 1.7E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 975 | 2.05E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 783 | 994 | 2.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 615 | 2.4E-106 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 200 | 6.3E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 782 | 3.2E-21 | - |
| SMART | SM00369 | LRR_typ_2 | 497 | 520 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 521 | 545 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 209 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 256 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 112 | 22.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 687 | 979 | 2.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 979 | 34.887672 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 716 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010686396.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QY06 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_128600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology