Basic Information
Locus ID:
Sbi_jg41037
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 15430648 | 15436951 | + | Sbi_jg41037 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 82,787.76 Da | 47.18 | 85.66 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 136 | 4.9E-18 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 578 | 737 | 2.1E-30 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 325 | 396 | 5.4E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 555 | 740 | 4.99E-53 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 303 | 398 | 1.6E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 651 | 741 | 3.4E-24 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 414 | 507 | 5.2E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 537 | 650 | 1.6E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 138 | 2.9E-23 | IPR038408 |
| SMART | SM00220 | serkin_6 | 575 | 738 | 1.7E-7 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 294 | 399 | 13.374928 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 139 | 17.81951 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 575 | 741 | 28.386032 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 402 | 508 | 11.166216 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 696 | 708 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 581 | 603 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.3 | - | 0 |
| RefSeq | XP_021866631.1 | cysteine-rich receptor-like protein kinase 10 [Spinacia oleracea] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N944 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 7 | Sbi_jg17202, Sbi_jg1866, Sbi_jg34766, Sbi_jg41037 ... |