halophFGD

Basic Information

Locus ID: Sbi_jg41034

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000005l	15403178	15403920	-	Sbi_jg41034

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.13	18,972.18 Da	61.68	79.09	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	3	130	7.9E-12	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	2	162	1.16E-23	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	138	5.2E-28	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	137	12.457014	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G45860.1	cysteine-rich RLK (RECEPTOR-like protein kinase) 4. Encodes a cysteine-rich receptor-like protein kinase. Involved in programmed cell death and defense response to pathogen.
RefSeq	XP_021726241.1	cysteine-rich receptor-like protein kinase 6 [Chenopodium quinoa]
Swiss-Prot	Q9LZU4	Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana OX=3702 GN=CRK4 PE=2 SV=1
TrEMBL	A0A803LKU4	Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg41028, Sbi_jg41034
Amaranthaceae	Salicornia europaea	1	Seu_jg1515
Amaranthaceae	Suaeda glauca	1	Sgl46062
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000045815, gene:ENSEOMG00000047275
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.8BG0002840