Basic Information
Locus ID:
Sbi_jg40999
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 13829537 | 13839401 | + | Sbi_jg40999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 77,152.93 Da | 51.11 | 84.15 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 375 | 644 | 2.26862E-86 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 127 | 1.1E-20 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 370 | 570 | 2.4E-50 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 150 | 241 | 2.6E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 642 | 1.48E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 656 | 9.3E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 445 | 1.5E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 129 | 2.5E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 243 | 5.8E-16 | IPR038408 |
| SMART | SM00220 | serkin_6 | 369 | 642 | 1.2E-39 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 244 | 14.361607 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 130 | 19.014387 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 646 | 39.679096 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 398 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 680 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021766962.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803NDA4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40995, Sbi_jg40999 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1534 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl46124, Sgl50824 |