Basic Information
Locus ID:
Sbi_jg40995
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 13680552 | 13691532 | + | Sbi_jg40995 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 75,896.74 Da | 47.24 | 87.19 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 363 | 632 | 2.29286E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 358 | 558 | 8.2E-50 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 127 | 4.6E-21 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 241 | 9.5E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 630 | 7.96E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 243 | 8.9E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 433 | 5.7E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 129 | 2.1E-24 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 644 | 5.0E-55 | - |
| SMART | SM00220 | serkin_6 | 357 | 630 | 8.5E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 634 | 39.650829 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 130 | 19.213533 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 244 | 14.606013 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 386 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021766962.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803NDA4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40995, Sbi_jg40999 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1534 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl46124, Sgl50824 |