Basic Information
Locus ID:
Sbi_jg40991
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 13588494 | 13597549 | + | Sbi_jg40991 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 54,675.32 Da | 49.98 | 81.96 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 151 | 241 | 5.8E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 127 | 2.8E-21 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 243 | 5.4E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 129 | 1.2E-24 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 244 | 14.606013 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 130 | 19.213533 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 495 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021766962.1 | cysteine-rich receptor-like protein kinase 10 isoform X2 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803NDA4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 2 | BVRB_8g187030, BVRB_8g187180 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg40991 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46131, Sgl46132, Sgl50830, Sgl50831 |