Basic Information
Locus ID:
Sbi_jg40980
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 13327850 | 13329999 | + | Sbi_jg40980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 14,218.53 Da | 39.43 | 105.45 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 36 | 123 | 4.6E-12 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 123 | 6.55E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 25 | 123 | 1.1E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 123 | 9.375802 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.2 | - | 0 |
| RefSeq | XP_021835682.1 | cysteine-rich receptor-like protein kinase 10 [Spinacia oleracea] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | A0A438HPL6 | G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Vitis vinifera OX=29760 GN=RKS1_9 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40980, Sbi_jg40987 |