Basic Information
Locus ID:
Sbi_jg40875
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000005l | 8648129 | 8650825 | + | Sbi_jg40875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 30,440.54 Da | 31.58 | 93.10 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 218 | 1.4E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 244 | 9.04E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 25 | 228 | 3.9E-61 | - |
| SMART | SM00220 | serkin_6 | 1 | 228 | 3.3E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 228 | 28.032682 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 70 | 82 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.3 | - | 0 |
| RefSeq | XP_021766696.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1E5 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |