Basic Information
Locus ID:
Sbi_jg40410
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000029l | 6738694 | 6745532 | + | Sbi_jg40410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 18,393.18 Da | 40.35 | 99.70 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 61 | 114 | 5.0E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 125 | 2.43E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 59 | 133 | 4.1E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 165 | 14.082424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 83 | 95 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010667775.2 | serine/threonine-protein kinase EDR1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZBZ9 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg15421, Sbi_jg20712, Sbi_jg40410, Sbi_jg49555 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112214 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G10662 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0746s00001.v1.0 |
| Poaceae | Oryza coarctata | 1 | Oco04G011850 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G015490 |