halophFGD

Basic Information

Locus ID: Sbi_jg40251

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: protein serine/threonine kinase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000029l	3646345	3648451	+	Sbi_jg40251

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.65	13,428.34 Da	48.44	94.22	0.34

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	53	5.6E-6	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23310.2	-
RefSeq	XP_048493656.1	uncharacterized protein LOC104901055 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	O65482	Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana OX=3702 GN=CRK23 PE=2 SV=1
TrEMBL	A0A803ND61	Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg40251, Sbi_jg50240, Sbi_jg61232
Amaranthaceae	Salicornia europaea	1	Seu_jg22961
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000003699
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.6AG0002330