Basic Information
Locus ID:
Sbi_jg40208
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000029l | 2766045 | 2775117 | + | Sbi_jg40208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 76,930.26 Da | 39.19 | 90.08 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 410 | 681 | 1.24032E-90 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 167 | 187 | 0.28 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 95 | 152 | 1.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 6.6E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 406 | 678 | 6.0E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 235 | 2.61E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 678 | 7.79E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 686 | 1.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 253 | 5.0E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 367 | 481 | 3.3E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 681 | 37.728607 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 95 | 116 | 7.388525 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 290 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021854199.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 isoform X1 [Spinacia oleracea] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZD9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_012130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology