Basic Information
Locus ID:
Sbi_jg40164
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000029l | 1831513 | 1841027 | + | Sbi_jg40164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 59,902.33 Da | 36.77 | 85.55 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 378 | 449 | 5.5E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 41 | 360 | 3.3E-75 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 41 | 360 | 6.22E-81 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 40 | 366 | 5.1E-107 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 371 | 483 | 1.1E-10 | - |
| SMART | SM00768 | X8_cls | 377 | 462 | 8.1E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 275 | 288 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021766864.1 | glucan endo-1,3-beta-glucosidase 1-like [Chenopodium quinoa] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803M1V2 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology