Basic Information
Locus ID:
Sbi_jg40027
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000024l | 54012343 | 54018309 | + | Sbi_jg40027 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 110,265.81 Da | 34.48 | 100.62 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 83 | 6.9E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 708 | 982 | 1.3E-44 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 110 | 146 | 2.2E-6 | IPR025875 |
| Pfam | PF00560 | Leucine Rich Repeat | 475 | 494 | 0.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 208 | 230 | 1.3 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 184 | 205 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 520 | 540 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 984 | 2.83E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 465 | 1.33E-69 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 401 | 631 | 3.85E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 240 | 1.4E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 990 | 8.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 680 | 783 | 2.2E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 152 | 1.7E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 398 | 472 | 1.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 473 | 550 | 1.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 397 | 7.0E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 551 | 628 | 2.2E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 279 | 302 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 18.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 985 | 2.4E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 158 | 182 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 230 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 303 | 326 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 471 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 87.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 305 | 327 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 985 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A0K9RLJ0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_058400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology