Basic Information
Locus ID:
Sbi_jg39603
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000024l | 47500470 | 47502516 | + | Sbi_jg39603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 46,131.18 Da | 39.27 | 94.29 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 184 | 398 | 2.1E-56 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 184 | 401 | 9.66E-58 | IPR027417 |
| Gene3D | G3DSA:1.25.70.10 | Transcription termination factor 3, mitochondrial | 48 | 184 | 1.4E-22 | IPR038538 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 185 | 401 | 1.1E-64 | IPR036961 |
| SMART | SM00733 | mt_12 | 95 | 125 | 190.0 | IPR003690 |
| SMART | SM00129 | kinesin_4 | 132 | 394 | 5.1E-33 | IPR001752 |
| SMART | SM00733 | mt_12 | 129 | 159 | 2900.0 | IPR003690 |
| SMART | SM00733 | mt_12 | 164 | 202 | 510.0 | IPR003690 |
| SMART | SM00733 | mt_12 | 59 | 90 | 1.2 | IPR003690 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 184 | 401 | 53.934937 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 319 | 330 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 287 | 304 | 1.8E-22 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 373 | 394 | 1.8E-22 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 173 | 194 | 1.8E-22 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 320 | 338 | 1.8E-22 | IPR001752 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology