Basic Information
Locus ID:
Sbi_jg39519
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000024l | 45439125 | 45450131 | + | Sbi_jg39519 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 48,210.37 Da | 37.82 | 84.99 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_016665607.2 | F-box/LRR-repeat protein At5g63520 [Gossypium hirsutum] | 0 |
| TrEMBL | A0A1U8HHL8 | F-box/LRR-repeat protein At5g63520-like OS=Gossypium hirsutum OX=3635 GN=LOC107886239 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_14095, gene_8780 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah036449 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg39519 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14814 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016872 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl12725, Sgl17967 |