Basic Information
Locus ID:
Sbi_jg39378
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000024l | 41348950 | 41350009 | + | Sbi_jg39378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.17 | 35,644.50 Da | 71.90 | 66.13 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 274 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021771311.1 | serine/threonine-protein phosphatase 7 long form homolog [Chenopodium quinoa] | 0 |
| TrEMBL | A0A6P6SIB1 | uncharacterized protein LOC113691756 OS=Coffea arabica OX=13443 GN=LOC113691756 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_22859, gene_3677, gene_6214 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah006596, Ah026904, Ah033066 |
| Amaranthaceae | Salicornia bigelovii | 69 | Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15751, Seu_jg21945 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026342 |
| Apiaceae | Apium graveolens | 1 | Ag9G00627 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10686, Lb3G16601 |
| Poaceae | Oryza coarctata | 2 | Oco13G014430, Oco16G012190 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599869, gene-LOC132609715, gene-LOC132622063 |
| Solanaceae | Solanum chilense | 2 | SOLCI003030300, SOLCI005764100 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC114074771, gene-LOC114075281, gene-LOC114078436 |