Basic Information
Locus ID:
Sbi_jg38318
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000023l | 24739319 | 24739633 | + | Sbi_jg38318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 7,938.44 Da | 39.56 | 126.20 | 0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00026 | Eukaryotic aspartyl protease | 11 | 70 | 1.2E-14 | IPR033121 |
| SUPERFAMILY | SSF50630 | Acid proteases | 9 | 70 | 4.98E-16 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 10 | 71 | 5.3E-27 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 68 | 13.721998 | IPR033121 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62290.1 | Saposin-like aspartyl protease family protein. | 0 |
| RefSeq | XP_010694065.2 | aspartic proteinase [Beta vulgaris subsp. vulgaris] | 0 |
| P42211 | Aspartic proteinase OS=Oryza sativa subsp. japonica OX=39947 GN=RAP PE=2 SV=2 | 0 | |
| TrEMBL | A0A0J8BCL6 | Aspartic proteinase-like OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g070190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg38318 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25822 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000010767 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G004750 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3149.V1.1 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5128 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049989 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G098300 |
| Poaceae | Triticum aestivum | 1 | TraesCS3B02G269300.1 |
| Poaceae | Zea mays | 19 | Zm00001eb046200_P001, Zm00001eb056740_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-56591 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g09600 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-22268 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g06120.v3.1 |