Basic Information
Locus ID:
Sbi_jg38050
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000023l | 19059433 | 19073077 | + | Sbi_jg38050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 84,690.02 Da | 52.40 | 71.69 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 493 | 739 | 1.00203E-127 | - |
| CDD | cd00130 | PAS | 125 | 226 | 5.96316E-12 | IPR000014 |
| Pfam | PF00989 | PAS fold | 120 | 224 | 7.1E-12 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 487 | 739 | 2.3E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 738 | 2.97E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 120 | 223 | 8.9E-19 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 480 | 564 | 2.9E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 126 | 231 | 5.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 763 | 1.0E-62 | - |
| SMART | SM00091 | pas_2 | 116 | 182 | 1.1E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 487 | 747 | 6.7E-58 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 120 | 226 | 1.7E-12 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 114 | 185 | 13.354675 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 747 | 43.707287 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 606 | 618 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 561 | 574 | 9.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 666 | 688 | 9.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 600 | 618 | 9.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 710 | 732 | 9.5E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 647 | 657 | 9.5E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 439 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021730341.1 | tyrosine-protein kinase receptor UFO-like [Chenopodium quinoa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N2C5 | PAS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology