Basic Information
Locus ID:
Sbi_jg37767
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000023l | 7116163 | 7118118 | - | Sbi_jg37767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 71,799.32 Da | 47.72 | 92.67 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 124 | 170 | 0.14 | IPR018392 |
| Pfam | PF01476 | LysM domain | 71 | 108 | 0.16 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 626 | 3.1E-37 | IPR001245 |
| Pfam | PF01476 | LysM domain | 191 | 235 | 0.023 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 627 | 6.37E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 424 | 5.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 635 | 4.6E-49 | - |
| SMART | SM00257 | LysM_2 | 63 | 108 | 12.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 190 | 235 | 1.5 | IPR018392 |
| SMART | SM00257 | LysM_2 | 123 | 170 | 1.7 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 627 | 31.73579 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 122 | 169 | 9.237266 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 189 | 234 | 10.48469 | IPR018392 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 471 | 483 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RWU9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_025190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology